Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine dehydrogenase (decarboxylating) beta subunit | SAMN06295933_2099 | Not Available | Negative | 2259875 - 2261320 | 52885.8 |
| glycine dehydrogenase (decarboxylating) alpha subunit | SAMN06295933_2100 | Not Available | Negative | 2261320 - 2262651 | 48585.5 |
| glycine cleavage system h protein | SAMN06295933_2101 | Not Available | Negative | 2262745 - 2263125 | 13796.8 |
| lysine methyltransferase | SAMN06295933_2102 | Not Available | Positive | 2263473 - 2264141 | 25091.9 |
| transcriptional regulator, copg family | SAMN06295933_2103 | Not Available | Positive | 2264156 - 2264575 | 15694.8 |
| gtp cyclohydrolase i | SAMN06295933_2104 | Not Available | Positive | 2264646 - 2265413 | 28539.1 |
| uncharacterized conserved protein, duf1499 family | SAMN06295933_2105 | Not Available | Negative | 2265521 - 2265979 | 17043.6 |
| rhodanese-related sulfurtransferase | SAMN06295933_2106 | Not Available | Negative | 2266084 - 2266518 | 15546.7 |
| transcriptional regulator, badm/rrf2 family | SAMN06295933_2107 | Not Available | Negative | 2266822 - 2267253 | 15808.5 |
| hypothetical protein | SAMN06295933_2108 | Not Available | Positive | 2267493 - 2268896 | 51258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

