Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase, alpha chain | SAMN06295933_2079 | Not Available | Positive | 2232893 - 2233660 | 27538.4 |
| rlob-like protein | SAMN06295933_2080 | Not Available | Negative | 2233760 - 2234422 | 25316.6 |
| hypothetical protein | SAMN06295933_2081 | Not Available | Negative | 2234422 - 2235711 | 49129.0 |
| hypothetical protein | SAMN06295933_2082 | Not Available | Negative | 2235922 - 2236740 | 30957.3 |
| two-component system, ompr family, sensor histidine kinase cpxa | SAMN06295933_2083 | Not Available | Negative | 2236860 - 2238257 | 53000.4 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN06295933_2084 | Not Available | Negative | 2238254 - 2238964 | 26609.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06295933_2085 | Not Available | Positive | 2239113 - 2240618 | 54611.8 |
| rnd family efflux transporter, mfp subunit | SAMN06295933_2086 | Not Available | Positive | 2240631 - 2241839 | 44001.6 |
| multidrug efflux pump subunit acrb | SAMN06295933_2087 | Not Available | Positive | 2241845 - 2245039 | 116665.0 |
| adp-heptose:lps heptosyltransferase | SAMN06295933_2088 | Not Available | Positive | 2245193 - 2246605 | 52830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

