Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superfamily ii dna and rna helicase | SAMN06295933_2059 | Not Available | Positive | 2211652 - 2212956 | 47403.7 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN06295933_2060 | Not Available | Positive | 2213201 - 2213464 | 9758.35 |
| hypothetical protein | SAMN06295933_2061 | Not Available | Positive | 2213615 - 2214577 | 36779.5 |
| aspartate ammonia-lyase | SAMN06295933_2062 | Not Available | Negative | 2214638 - 2216056 | 51561.4 |
| chloramphenicol-sensitive protein rard | SAMN06295933_2063 | Not Available | Negative | 2216282 - 2217178 | 33379.2 |
| putative salt-induced outer membrane protein ydiy | SAMN06295933_2064 | Not Available | Negative | 2217294 - 2218319 | 38890.0 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN06295933_2065 | Not Available | Negative | 2218471 - 2219703 | 45685.3 |
| nitrogen regulatory protein p-ii family | SAMN06295933_2066 | Not Available | Negative | 2219845 - 2220174 | 11998.8 |
| ammonium transporter | SAMN06295933_2067 | Not Available | Negative | 2220203 - 2221573 | 47362.0 |
| fructose-bisphosphate aldolase, class i | SAMN06295933_2068 | Not Available | Positive | 2222111 - 2222908 | 28262.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

