Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose binding lectin domain-containing protein | SAMN06295933_2019 | Not Available | Positive | 2166627 - 2167124 | 18474.3 |
| hypothetical protein | SAMN06295933_2020 | Not Available | Positive | 2167205 - 2167375 | 6499.18 |
| polar amino acid transport system substrate-binding protein | SAMN06295933_2021 | Not Available | Negative | 2167403 - 2168185 | 30034.9 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06295933_2022 | Not Available | Positive | 2168221 - 2169273 | 40913.3 |
| abc-type uncharacterized transport system, substrate-binding protein | SAMN06295933_2023 | Not Available | Positive | 2169416 - 2170480 | 38861.0 |
| pas domain s-box-containing protein | SAMN06295933_2024 | Not Available | Positive | 2170542 - 2173520 | 109007.0 |
| nitrogen fixation protein nifu | SAMN06295933_2025 | Not Available | Negative | 2173594 - 2174040 | 15943.8 |
| transcriptional regulator, lysr family | SAMN06295933_2026 | Not Available | Positive | 2174270 - 2175166 | 33147.5 |
| hypothetical protein | SAMN06295933_2027 | Not Available | Positive | 2175216 - 2176385 | 45407.0 |
| hypothetical protein | SAMN06295933_2028 | Not Available | Negative | 2176382 - 2176981 | 22026.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

