Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, chemotaxis family, sensor kinase chea | SAMN06295933_1949 | Not Available | Positive | 2089100 - 2089507 | 15043.0 |
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN06295933_1950 | Not Available | Positive | 2089650 - 2090741 | 40592.1 |
| 3-dehydroquinate synthase | SAMN06295933_1951 | Not Available | Positive | 2090741 - 2091829 | 39399.9 |
| cystathionine beta-lyase | SAMN06295933_1952 | Not Available | Positive | 2091977 - 2093140 | 43020.3 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN06295933_1953 | Not Available | Negative | 2093234 - 2095102 | 69745.7 |
| hypothetical protein | SAMN06295933_1954 | Not Available | Positive | 2095354 - 2095716 | 13683.7 |
| putative zinc-or iron-chelating domain-containing protein | SAMN06295933_1955 | Not Available | Positive | 2095789 - 2096553 | 28264.0 |
| tryptophan synthase, beta chain | SAMN06295933_1956 | Not Available | Negative | 2096633 - 2097844 | 43714.2 |
| transaldolase | SAMN06295933_1957 | Not Available | Positive | 2098302 - 2098946 | 23416.3 |
| 4fe-4s binding domain-containing protein | SAMN06295933_1958 | Not Available | Positive | 2098986 - 2099783 | 28553.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

