Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295933_1859 | Not Available | Negative | 1985943 - 1986449 | 19730.4 |
| hypothetical protein | SAMN06295933_1860 | Not Available | Positive | 1986742 - 1986852 | 4379.56 |
| putative regulatory protein, fmdb family | SAMN06295933_1861 | Not Available | Positive | 1986996 - 1987286 | 10101.4 |
| adenylosuccinate lyase | SAMN06295933_1862 | Not Available | Positive | 1987458 - 1988753 | 48849.1 |
| murein l,d-transpeptidase yafk | SAMN06295933_1863 | Not Available | Positive | 1989045 - 1990313 | 47889.7 |
| hypothetical protein | SAMN06295933_1864 | Not Available | Positive | 1990313 - 1991017 | 26784.2 |
| carboxypeptidase controlling helical cell shape | SAMN06295933_1865 | Not Available | Positive | 1990983 - 1992725 | 64767.6 |
| sugar phosphate isomerase/epimerase | SAMN06295933_1866 | Not Available | Positive | 1992747 - 1993556 | 31124.1 |
| dimethylargininase | SAMN06295933_1867 | Not Available | Positive | 1993789 - 1994574 | 28338.9 |
| shikimate kinase | SAMN06295933_1868 | Not Available | Negative | 1994585 - 1995106 | 19395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

