Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonoacetate hydrolase | SAMN06295933_1839 | Not Available | Negative | 1968081 - 1968449 | 13411.4 |
| spore maturation protein cgeb | SAMN06295933_1840 | Not Available | Positive | 1968801 - 1970459 | 62723.9 |
| Trna-asp | Not Available | Not Available | Positive | 1970553 - 1970629 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1970676 - 1970751 | Not Available |
| fructose-bisphosphate aldolase, class i | SAMN06295933_1843 | Not Available | Negative | 1970897 - 1971673 | 27545.2 |
| 16s rrna (cytosine1407-c5)-methyltransferase | SAMN06295933_1844 | Not Available | Negative | 1971697 - 1972953 | 45993.7 |
| hypothetical protein | SAMN06295933_1845 | Not Available | Positive | 1973351 - 1974991 | 60846.4 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN06295933_1846 | Not Available | Positive | 1975069 - 1976097 | 37944.9 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN06295933_1847 | Not Available | Positive | 1976156 - 1976653 | 18400.2 |
| trap transporter, dctm subunit | SAMN06295933_1848 | Not Available | Positive | 1976672 - 1977976 | 45943.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

