Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN06295933_1779 | Not Available | Negative | 1897733 - 1899124 | 50277.1 |
| amino acid abc transporter substrate-binding protein, paat family | SAMN06295933_1780 | Not Available | Positive | 1899804 - 1900589 | 28668.5 |
| polar amino acid transport system permease protein | SAMN06295933_1781 | Not Available | Positive | 1900641 - 1901297 | 24386.7 |
| amino acid abc transporter atp-binding protein, paat family | SAMN06295933_1782 | Not Available | Positive | 1901349 - 1902080 | 26807.5 |
| transcriptional regulator containing gaf, aaa-type atpase, and dna-binding fis domains | SAMN06295933_1783 | Not Available | Negative | 1902195 - 1903832 | 61085.5 |
| hpp family protein | SAMN06295933_1784 | Not Available | Negative | 1903987 - 1904754 | 27621.6 |
| carbon-monoxide dehydrogenase catalytic subunit | SAMN06295933_1785 | Not Available | Negative | 1904893 - 1906905 | 73889.9 |
| hamp domain-containing protein | SAMN06295933_1786 | Not Available | Positive | 1907271 - 1908701 | 53177.2 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN06295933_1787 | Not Available | Positive | 1908673 - 1910037 | 51282.1 |
| hypothetical protein | SAMN06295933_1788 | Not Available | Positive | 1910499 - 1910933 | 16424.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

