Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, duf1786 family | SAMN06295933_1748 | Not Available | Positive | 1858431 - 1859468 | 37681.6 |
| pas/pac sensor hybrid histidine kinase | SAMN06295933_1749 | Not Available | Positive | 1859622 - 1861784 | 80327.0 |
| hypothetical protein | SAMN06295933_1750 | Not Available | Negative | 1861800 - 1862222 | 15682.8 |
| hypothetical protein | SAMN06295933_1751 | Not Available | Negative | 1862329 - 1862850 | 19758.6 |
| signal transduction histidine kinase | SAMN06295933_1752 | Not Available | Negative | 1862859 - 1867004 | 154507.0 |
| ornithine--oxo-acid transaminase | SAMN06295933_1753 | Not Available | Negative | 1867129 - 1868328 | 43464.8 |
| hypothetical protein | SAMN06295933_1754 | Not Available | Positive | 1868494 - 1868595 | 3905.88 |
| hypothetical protein | SAMN06295933_1755 | Not Available | Negative | 1868579 - 1869178 | 21718.4 |
| hypothetical protein | SAMN06295933_1756 | Not Available | Negative | 1869217 - 1870065 | 31458.2 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN06295933_1757 | Not Available | Negative | 1870062 - 1872257 | 81154.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

