Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated protein (cas_csx3) | SAMN06295933_1737 | Not Available | Negative | 1848589 - 1848906 | 11867.4 |
| hypothetical protein | SAMN06295933_1739 | Not Available | Positive | 1849099 - 1849677 | 21480.8 |
| hd domain-containing protein | SAMN06295933_1740 | Not Available | Negative | 1849702 - 1850766 | 40069.3 |
| hypothetical protein | SAMN06295933_1741 | Not Available | Positive | 1851126 - 1851311 | 7039.58 |
| polar amino acid transport system substrate-binding protein | SAMN06295933_1742 | Not Available | Positive | 1851295 - 1852071 | 29349.8 |
| chloride channel protein, cic family | SAMN06295933_1743 | Not Available | Negative | 1852068 - 1853807 | 61556.0 |
| concentrative nucleoside transporter, cnt family | SAMN06295933_1744 | Not Available | Negative | 1853810 - 1855051 | 43279.7 |
| chemotaxis protein chex | SAMN06295933_1745 | Not Available | Positive | 1855350 - 1855808 | 15975.5 |
| response regulator receiver domain-containing protein | SAMN06295933_1746 | Not Available | Positive | 1855845 - 1857434 | 57406.1 |
| pgap1-like protein | SAMN06295933_1747 | Not Available | Negative | 1857498 - 1858310 | 30047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

