Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impj | SAMN06295933_1707 | Not Available | Positive | 1811943 - 1813322 | 51703.8 |
| type vi secretion system protein impk | SAMN06295933_1708 | Not Available | Positive | 1813329 - 1814078 | 28606.8 |
| type vi secretion system protein impl | SAMN06295933_1709 | Not Available | Positive | 1814112 - 1817603 | 131372.0 |
| hypothetical protein | SAMN06295933_1710 | Not Available | Positive | 1817631 - 1818392 | 28592.1 |
| fructokinase | SAMN06295933_1711 | Not Available | Positive | 1818584 - 1819468 | 32092.3 |
| hypothetical protein | SAMN06295933_1712 | Not Available | Positive | 1819490 - 1820161 | 25166.6 |
| udpglucose--hexose-1-phosphate uridylyltransferase | SAMN06295933_1713 | Not Available | Positive | 1820340 - 1821431 | 42152.8 |
| galactokinase | SAMN06295933_1714 | Not Available | Positive | 1821433 - 1822779 | 48574.4 |
| transcriptional regulator, laci family | SAMN06295933_1715 | Not Available | Positive | 1822781 - 1823806 | 37602.2 |
| aldose 1-epimerase | SAMN06295933_1716 | Not Available | Positive | 1823807 - 1824868 | 38805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

