Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein imph | SAMN06295933_1697 | Not Available | Positive | 1796770 - 1797813 | 39237.4 |
| type vi secretion system protein vasg | SAMN06295933_1698 | Not Available | Positive | 1797842 - 1800472 | 95702.9 |
| type vi secretion system secreted protein vgrg | SAMN06295933_1699 | Not Available | Positive | 1800496 - 1802805 | 84896.4 |
| pentapeptide repeat-containing protein | SAMN06295933_1700 | Not Available | Positive | 1802818 - 1806654 | 140496.0 |
| uncharacterized protein yjbi, contains pentapeptide repeats | SAMN06295933_1701 | Not Available | Positive | 1806651 - 1807715 | 38261.4 |
| protein of unknown function | SAMN06295933_1702 | Not Available | Positive | 1807738 - 1808361 | 22679.9 |
| protein of unknown function | SAMN06295933_1703 | Not Available | Positive | 1808371 - 1808775 | 13728.8 |
| hypothetical protein | SAMN06295933_1704 | Not Available | Positive | 1808789 - 1809562 | 27765.4 |
| type vi secretion system protein impc | SAMN06295933_1705 | Not Available | Negative | 1809619 - 1811160 | 55996.3 |
| predicted component of the type vi protein secretion system | SAMN06295933_1706 | Not Available | Positive | 1811358 - 1811939 | 21081.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

