Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06295933_1567 | Not Available | Positive | 1667880 - 1668434 | 20655.9 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN06295933_1568 | Not Available | Positive | 1668604 - 1669203 | 21404.9 |
| gtp-binding protein hflx | SAMN06295933_1569 | Not Available | Positive | 1669445 - 1670929 | 55533.2 |
| bacterial translation initiation factor 1 (bif-1) | SAMN06295933_1570 | Not Available | Positive | 1671212 - 1671430 | 8281.28 |
| cold shock protein (beta-ribbon, cspa family) | SAMN06295933_1571 | Not Available | Positive | 1671482 - 1671691 | 7771.25 |
| hypothetical protein | SAMN06295933_1572 | Not Available | Negative | 1671780 - 1672091 | 12137.4 |
| two-component system, chemotaxis family, response regulator chev | SAMN06295933_1573 | Not Available | Negative | 1672298 - 1673245 | 35252.5 |
| response regulator receiver domain-containing protein | SAMN06295933_1574 | Not Available | Positive | 1673447 - 1673812 | 13752.0 |
| hydrogenase expression/formation protein hypd | SAMN06295933_1575 | Not Available | Positive | 1674039 - 1675133 | 39581.3 |
| hydrogenase maturation protein, carbamoyl dehydratase hype | SAMN06295933_1576 | Not Available | Positive | 1675135 - 1676142 | 35538.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

