Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN06295933_1507 | Not Available | Negative | 1603221 - 1605752 | 95530.7 |
| flagellin | SAMN06295933_1508 | Not Available | Positive | 1606631 - 1607515 | 30948.6 |
| isocitrate dehydrogenase (nadp) | SAMN06295933_1509 | Not Available | Positive | 1608001 - 1609146 | 41270.6 |
| hypothetical protein | SAMN06295933_1510 | Not Available | Negative | 1609233 - 1609565 | 11851.5 |
| aspartate/methionine/tyrosine aminotransferase | SAMN06295933_1511 | Not Available | Negative | 1609712 - 1610872 | 43804.6 |
| aminodeoxychorismate synthase, glutamine amidotransferase subunit | SAMN06295933_1512 | Not Available | Positive | 1611120 - 1611698 | 21160.4 |
| para-aminobenzoate synthetase component 1 | SAMN06295933_1513 | Not Available | Positive | 1611664 - 1612968 | 48699.0 |
| 4-amino-4-deoxychorismate lyase | SAMN06295933_1514 | Not Available | Positive | 1612965 - 1613732 | 29300.2 |
| tryptophanyl-trna synthetase | SAMN06295933_1515 | Not Available | Negative | 1613855 - 1614850 | 37734.5 |
| zn-dependent protease (includes spoivfb) | SAMN06295933_1516 | Not Available | Negative | 1614874 - 1615512 | 23129.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

