Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction endonuclease ruvc | SAMN06295933_1467 | Not Available | Positive | 1563107 - 1563613 | 17782.8 |
| holliday junction dna helicase subunit ruva | SAMN06295933_1468 | Not Available | Positive | 1563610 - 1564224 | 22440.1 |
| holliday junction dna helicase subunit ruvb | SAMN06295933_1469 | Not Available | Positive | 1564234 - 1565214 | 36091.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN06295933_1470 | Not Available | Positive | 1565363 - 1566820 | 54502.6 |
| transposase | SAMN06295933_1471 | Not Available | Negative | 1567282 - 1568154 | 33619.2 |
| cyclic pyranopterin monophosphate synthase subunit moaa | SAMN06295933_1472 | Not Available | Negative | 1568177 - 1569172 | 37342.3 |
| fdhe protein | SAMN06295933_1473 | Not Available | Negative | 1569174 - 1570121 | 35418.1 |
| fdhd protein | SAMN06295933_1474 | Not Available | Negative | 1570426 - 1571214 | 29147.9 |
| tungstate transport system substrate-binding protein | SAMN06295933_1475 | Not Available | Positive | 1571497 - 1572324 | 30116.7 |
| tungstate transport system permease protein | SAMN06295933_1476 | Not Available | Positive | 1572400 - 1573095 | 24593.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

