Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine 3-dehydrogenase | SAMN06295933_1457 | Not Available | Negative | 1550448 - 1551482 | 37623.7 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN06295933_1458 | Not Available | Negative | 1551497 - 1552687 | 43255.0 |
| transcriptional regulator, asnc family | SAMN06295933_1459 | Not Available | Positive | 1552920 - 1553381 | 17312.9 |
| hypothetical protein | SAMN06295933_1460 | Not Available | Negative | 1553406 - 1554458 | 40353.8 |
| pas domain s-box-containing protein | SAMN06295933_1461 | Not Available | Positive | 1554639 - 1556912 | 85876.1 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN06295933_1462 | Not Available | Positive | 1557145 - 1559235 | 75180.2 |
| hyperosmotically inducible protein | SAMN06295933_1463 | Not Available | Negative | 1559296 - 1559961 | 24474.9 |
| protein of unknown function | SAMN06295933_1464 | Not Available | Negative | 1560034 - 1561521 | 56829.1 |
| 23s rrna um-2552 2'-o-methyltransferase | SAMN06295933_1465 | Not Available | Positive | 1561627 - 1562226 | 22677.3 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN06295933_1466 | Not Available | Positive | 1562357 - 1563106 | 27054.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

