Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN06295933_1366 | Not Available | Negative | 1446789 - 1447595 | 30483.5 |
| hypothetical protein | SAMN06295933_1367 | Not Available | Positive | 1447788 - 1448420 | 24002.0 |
| atp-binding cassette protein, chvd family | SAMN06295933_1368 | Not Available | Negative | 1448492 - 1450174 | 62743.6 |
| methyl-accepting chemotaxis protein | SAMN06295933_1369 | Not Available | Positive | 1450508 - 1452823 | 83112.0 |
| kef-type potassium/proton antiporter, cpa2 family | SAMN06295933_1370 | Not Available | Positive | 1453013 - 1454998 | 71524.7 |
| hypothetical protein | SAMN06295933_1371 | Not Available | Positive | 1455027 - 1455815 | 28889.6 |
| zinc transporter, zip family | SAMN06295933_1372 | Not Available | Positive | 1455868 - 1456686 | 29007.0 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN06295933_1373 | Not Available | Positive | 1456747 - 1457307 | 20387.8 |
| methyl-accepting chemotaxis protein/hemerythrin | SAMN06295933_1374 | Not Available | Negative | 1457408 - 1459132 | 62342.5 |
| transcriptional regulator, lysr family | SAMN06295933_1375 | Not Available | Negative | 1459279 - 1460208 | 35000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

