Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein involved in outer membrane biogenesis | SAMN06295933_1316 | Not Available | Positive | 1384561 - 1386627 | 75042.5 |
| putative abc transport system atp-binding protein | SAMN06295933_1317 | Not Available | Positive | 1386656 - 1387348 | 25386.8 |
| putative abc transport system permease protein | SAMN06295933_1318 | Not Available | Positive | 1387345 - 1388157 | 29464.2 |
| hypothetical protein | SAMN06295933_1319 | Not Available | Negative | 1388245 - 1389927 | 63074.1 |
| carbonic anhydrase | SAMN06295933_1320 | Not Available | Positive | 1390261 - 1390932 | 25259.2 |
| hypothetical protein | SAMN06295933_1321 | Not Available | Negative | 1390960 - 1391433 | 17953.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN06295933_1322 | Not Available | Positive | 1391623 - 1394667 | 115949.0 |
| yhch/yjgk/yial family protein | SAMN06295933_1323 | Not Available | Negative | 1394696 - 1395169 | 17811.5 |
| peroxiredoxin | SAMN06295933_1324 | Not Available | Negative | 1395263 - 1395865 | 22396.3 |
| peroxiredoxin | SAMN06295933_1325 | Not Available | Negative | 1395895 - 1396449 | 20759.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

