Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lysine 2,3-aminomutase | SAMN06295933_1296 | Not Available | Positive | 1367237 - 1368478 | 46114.6 |
| d-alanine-d-alanine ligase | SAMN06295933_1297 | Not Available | Positive | 1368480 - 1369481 | 36100.2 |
| d-alanine-d-alanine ligase | SAMN06295933_1298 | Not Available | Positive | 1369481 - 1370479 | 36447.5 |
| acetyltransferase (gnat) family protein | SAMN06295933_1299 | Not Available | Positive | 1370469 - 1371014 | 20422.1 |
| hypothetical protein | SAMN06295933_1300 | Not Available | Positive | 1371053 - 1371328 | 10494.1 |
| hypothetical protein | SAMN06295933_1301 | Not Available | Negative | 1371419 - 1371802 | 14783.2 |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN06295933_1302 | Not Available | Positive | 1372098 - 1372463 | 13845.5 |
| fic/doc family protein | SAMN06295933_1303 | Not Available | Negative | 1372460 - 1373122 | 24875.0 |
| hypothetical protein | SAMN06295933_1304 | Not Available | Negative | 1373208 - 1373708 | 18709.3 |
| hepn domain-containing protein | SAMN06295933_1305 | Not Available | Positive | 1373951 - 1374697 | 29332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

