Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat (twin-arginine translocation) pathway signal sequence | SAMN06295933_1242 | Not Available | Positive | 1305989 - 1307371 | 50554.5 |
| hypothetical protein | SAMN06295933_1245 | Not Available | Positive | 1309048 - 1310274 | 46750.6 |
| tetratricopeptide repeat-containing protein | SAMN06295933_1246 | Not Available | Positive | 1310284 - 1312515 | 84339.3 |
| cytosine deaminase | SAMN06295933_1247 | Not Available | Positive | 1312554 - 1312997 | 16234.7 |
| sulfate permease, sulp family | SAMN06295933_1248 | Not Available | Negative | 1313030 - 1314718 | 60034.8 |
| nucleobase:cation symporter-2, ncs2 family/xanthine permease xanp | SAMN06295933_1250 | Not Available | Positive | 1315638 - 1317362 | 62320.3 |
| hypothetical protein | SAMN06295933_1251 | Not Available | Positive | 1317740 - 1319230 | 54019.5 |
| fumarase, class ii | SAMN06295933_1252 | Not Available | Positive | 1319402 - 1320790 | 49795.0 |
| putative intracellular protease/amidase | SAMN06295933_1253 | Not Available | Negative | 1320833 - 1321516 | 24904.6 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN06295933_1254 | Not Available | Positive | 1321729 - 1323264 | 57249.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

