Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06295933_1137 | Not Available | Positive | 1195392 - 1195565 | 6728.3 |
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN06295933_1138 | Not Available | Positive | 1195546 - 1196238 | 26247.7 |
| uracil-dna glycosylase | SAMN06295933_1139 | Not Available | Positive | 1196238 - 1196948 | 26881.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN06295933_1140 | Not Available | Positive | 1197156 - 1198232 | 38266.7 |
| prolyl-trna synthetase | SAMN06295933_1141 | Not Available | Positive | 1198233 - 1199975 | 64481.4 |
| exodeoxyribonuclease vii large subunit | SAMN06295933_1142 | Not Available | Positive | 1200019 - 1201482 | 54211.1 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN06295933_1143 | Not Available | Positive | 1201479 - 1202399 | 33955.8 |
| exodeoxyribonuclease vii small subunit | SAMN06295933_1144 | Not Available | Positive | 1202436 - 1202678 | 8893.51 |
| farnesyl-diphosphate synthase | SAMN06295933_1145 | Not Available | Positive | 1202668 - 1203558 | 31615.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN06295933_1146 | Not Available | Positive | 1203694 - 1205613 | 70172.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

