Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase subunit alpha | SAMN06295933_1127 | Not Available | Positive | 1182042 - 1182881 | 30305.8 |
| fumarate hydratase subunit beta | SAMN06295933_1128 | Not Available | Positive | 1182881 - 1183435 | 19652.7 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN06295933_1129 | Not Available | Positive | 1183479 - 1184798 | 47535.3 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN06295933_1130 | Not Available | Positive | 1184993 - 1186531 | 54598.8 |
| hypothetical protein | SAMN06295933_1131 | Not Available | Positive | 1186710 - 1187033 | 12075.0 |
| phosphotransacetylase | SAMN06295933_1132 | Not Available | Positive | 1187078 - 1189180 | 76869.8 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN06295933_1133 | Not Available | Positive | 1189423 - 1192971 | 129824.0 |
| hypothetical protein | SAMN06295933_1134 | Not Available | Negative | 1193122 - 1193736 | 21332.2 |
| ssu ribosomal protein s6p modification protein | SAMN06295933_1135 | Not Available | Negative | 1193872 - 1194777 | 32497.8 |
| uncharacterized conserved protein | SAMN06295933_1136 | Not Available | Negative | 1194779 - 1195267 | 18366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

