Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Desulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Desulfovibrio |
| Species | Desulfovibrio gilichinskyi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Curved rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | cecal digesta; gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Sus scrofa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1104753 bp
Thymine Count
1180632 bp
Guanine Count
878740 bp
Cytosine Count
798413 bp
Genome Length
3962538 bp
Protein-coding Genes
3494 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsi (penicillin-binding protein 3) | SAMN06295933_1097 | Not Available | Negative | 1142004 - 1143950 | 71190.6 |
| hypothetical protein | SAMN06295933_1098 | Not Available | Negative | 1143978 - 1144268 | 11011.5 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN06295933_1099 | Not Available | Negative | 1144276 - 1145250 | 35869.4 |
| mraz protein | SAMN06295933_1100 | Not Available | Negative | 1145370 - 1145819 | 16899.2 |
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN06295933_1101 | Not Available | Positive | 1146246 - 1147259 | 38451.9 |
| cbs domain-containing protein | SAMN06295933_1102 | Not Available | Negative | 1147339 - 1147824 | 18376.2 |
| putative hydrolases of hd superfamily | SAMN06295933_1103 | Not Available | Negative | 1148001 - 1149245 | 47759.4 |
| adenylate cyclase, class 1 | SAMN06295933_1104 | Not Available | Negative | 1149322 - 1153233 | 146682.0 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN06295933_1105 | Not Available | Negative | 1153347 - 1154750 | 51110.3 |
| hypothetical protein | SAMN06295933_1106 | Not Available | Positive | 1154789 - 1155097 | 12279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

