Rhizobium sp. RU36D

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. RU36D is a rod-shaped bacterium known for its significant role in nitrogen fixation, which is essential for sustainable agriculture. This species possesses a single replicon, indicating a streamlined genomic structure that may facilitate its adaptability and efficiency in various environments. The presence of flagella suggests motility, which can enhance its ability to colonize plant roots and establish symbiotic relationships. The accession number for Rhizobium sp. RU36D is FWXU00000000.1, which provides a reference point for genetic and functional studies of this bacterium. The genetic information associated with this accession can be pivotal for understanding its metabolic pathways and interactions within its ecological niche. In ecological terms, Rhizobium sp. RU36D contributes to soil health and fertility through its nitrogen-fixing capabilities. By converting atmospheric nitrogen into a form that plants can utilize, it plays a crucial role in promoting plant growth and enhancing crop yields. This interaction is particularly beneficial in agricultural systems where synthetic fertilizers may be limited or undesirable due to environmental concerns. Thus, the study of Rhizobium sp. RU36D and its traits can provide insights into sustainable agricultural practices and the management of soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. RU36D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. RU36D
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. RU36D genome assembly, contig: Ga0136764_177, whole

Gene Summary

Adenine Count

1175181 bp

Thymine Count

1171674 bp

Guanine Count

1859003 bp

Cytosine Count

1870412 bp

Genome Length

6076270 bp

Protein-coding Genes

5653 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase zinc-binding domain-containing proteinSAMN05880593_1331Not AvailablePositive5496933 - 549756622537.0
hypothetical proteinSAMN05880593_1332Not AvailablePositive5497646 - 54978767671.18
hypothetical proteinSAMN05880593_1333Not AvailableNegative5498012 - 549830210037.2
gtpase, g3e familySAMN05880593_1334Not AvailableNegative5498305 - 549942640908.9
zinc/manganese transport system substrate-binding proteinSAMN05880593_1335Not AvailableNegative5499498 - 550050535542.2
zinc/manganese transport system permease proteinSAMN05880593_1336Not AvailableNegative5500524 - 550139030463.7
zinc/manganese transport system atp-binding proteinSAMN05880593_1337Not AvailableNegative5501383 - 550218329415.4
gtpase, g3e familySAMN05880593_1338Not AvailablePositive5502302 - 550329137432.7
40-residue yvtn family beta-propeller repeat-containing proteinSAMN05880593_1339Not AvailablePositive5503334 - 550456944504.9
fur family transcriptional regulator, zinc uptake regulatorSAMN05880593_13310Not AvailablePositive5504646 - 550505915317.5

Displaying genes 5341 – 5350 of 5826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.