Rhizobium sp. RU36D

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. RU36D is a rod-shaped bacterium known for its significant role in nitrogen fixation, which is essential for sustainable agriculture. This species possesses a single replicon, indicating a streamlined genomic structure that may facilitate its adaptability and efficiency in various environments. The presence of flagella suggests motility, which can enhance its ability to colonize plant roots and establish symbiotic relationships. The accession number for Rhizobium sp. RU36D is FWXU00000000.1, which provides a reference point for genetic and functional studies of this bacterium. The genetic information associated with this accession can be pivotal for understanding its metabolic pathways and interactions within its ecological niche. In ecological terms, Rhizobium sp. RU36D contributes to soil health and fertility through its nitrogen-fixing capabilities. By converting atmospheric nitrogen into a form that plants can utilize, it plays a crucial role in promoting plant growth and enhancing crop yields. This interaction is particularly beneficial in agricultural systems where synthetic fertilizers may be limited or undesirable due to environmental concerns. Thus, the study of Rhizobium sp. RU36D and its traits can provide insights into sustainable agricultural practices and the management of soil ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. RU36D
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. RU36D
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. RU36D genome assembly, contig: Ga0136764_177, whole

Gene Summary

Adenine Count

1175181 bp

Thymine Count

1171674 bp

Guanine Count

1859003 bp

Cytosine Count

1870412 bp

Genome Length

6076270 bp

Protein-coding Genes

5653 genes

Non-Coding Genes

173 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formyl transferaseSAMN05880593_12623Not AvailablePositive5013197 - 501398528549.7
virulence factorSAMN05880593_12624Not AvailablePositive5014084 - 501438611003.9
methylene-tetrahydrofolate reductase c terminalSAMN05880593_12625Not AvailablePositive5014379 - 501497521710.1
5,10-methylenetetrahydrofolate reductaseSAMN05880593_12626Not AvailablePositive5014978 - 501607239739.8
5-methyltetrahydrofolate--homocysteine methyltransferaseSAMN05880593_12627Not AvailablePositive5016169 - 501712833517.6
uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domainSAMN05880593_12628Not AvailablePositive5017332 - 501936272889.8
transposaseSAMN05880593_12629Not AvailablePositive5019484 - 502024829086.9
uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 familySAMN05880593_12630Not AvailablePositive5020310 - 502088521702.6
dna-binding transcriptional regulator, lysr familySAMN05880593_12631Not AvailableNegative5020956 - 502185232718.6
hypothetical proteinSAMN05880593_12632Not AvailablePositive5021961 - 50221256607.98

Displaying genes 4851 – 4860 of 5826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.