Novosphingobium sp. B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. B1 is a bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant as it allows the organism to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization of various ecological niches. The bacterium has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptation. The genomic sequence of Novosphingobium sp. B1 can be accessed under the accession number FWXL00000000.1. This genomic information is crucial for understanding the metabolic pathways and ecological roles of the bacterium, as well as its potential applications in biotechnology or environmental science. In ecological terms, the motility provided by flagella suggests that Novosphingobium sp. B1 may play an important role in biogeochemical cycles, particularly in environments where mobility is essential for survival and interaction with other microorganisms. The capabilities of this bacterium to adapt to its surroundings could further indicate its significance in microbial communities, contributing to processes such as biodegradation or nutrient cycling. Overall, the traits of Novosphingobium sp. B1 highlight its potential ecological importance and provide a basis for future research into its functional roles in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. B1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. B1 genome assembly, contig: Ga0157230_168,

Gene Summary

Adenine Count

869038 bp

Thymine Count

863885 bp

Guanine Count

1446973 bp

Cytosine Count

1460816 bp

Genome Length

4640712 bp

Protein-coding Genes

4439 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase cbb3-type subunit 2SAMN06272759_11635Not AvailableNegative3908890 - 390963928017.2
cytochrome c oxidase cbb3-type subunit 1SAMN06272759_11636Not AvailableNegative3909664 - 391147567655.0
outer membrane proteinSAMN06272759_11637Not AvailablePositive3911546 - 391223223773.9
outer membrane receptor proteins, mostly fe transportSAMN06272759_11638Not AvailablePositive3912544 - 391495585002.7
putative membrane proteinSAMN06272759_11639Not AvailableNegative3915014 - 391597335378.4
transcriptional regulator, crp/fnr familySAMN06272759_11640Not AvailableNegative3916225 - 391692025666.8
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN06272759_11641Not AvailableNegative3917173 - 391766117877.3
hypothetical proteinSAMN06272759_11642Not AvailableNegative3917720 - 391863134226.8
atp-dependent rna helicase deadSAMN06272759_11643Not AvailablePositive3918884 - 392065964830.3
gtp-binding protein lepaSAMN06272759_11644Not AvailableNegative3920742 - 392255967094.1

Displaying genes 3801 – 3810 of 4514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.