Novosphingobium sp. B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. B1 is a bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant as it allows the organism to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization of various ecological niches. The bacterium has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptation. The genomic sequence of Novosphingobium sp. B1 can be accessed under the accession number FWXL00000000.1. This genomic information is crucial for understanding the metabolic pathways and ecological roles of the bacterium, as well as its potential applications in biotechnology or environmental science. In ecological terms, the motility provided by flagella suggests that Novosphingobium sp. B1 may play an important role in biogeochemical cycles, particularly in environments where mobility is essential for survival and interaction with other microorganisms. The capabilities of this bacterium to adapt to its surroundings could further indicate its significance in microbial communities, contributing to processes such as biodegradation or nutrient cycling. Overall, the traits of Novosphingobium sp. B1 highlight its potential ecological importance and provide a basis for future research into its functional roles in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. B1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. B1 genome assembly, contig: Ga0157230_168,

Gene Summary

Adenine Count

869038 bp

Thymine Count

863885 bp

Guanine Count

1446973 bp

Cytosine Count

1460816 bp

Genome Length

4640712 bp

Protein-coding Genes

4439 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hemolysin-type calcium-binding repeat-containing proteinSAMN06272759_11439Not AvailablePositive3783366 - 378549272842.1
membrane fusion protein prseSAMN06272759_11440Not AvailableNegative3785589 - 378692948560.3
atp-binding cassette, subfamily cSAMN06272759_11441Not AvailableNegative3786926 - 378870162195.8
phage integrase family proteinSAMN06272759_11442Not AvailableNegative3788939 - 379000639037.7
marr family proteinSAMN06272759_11443Not AvailablePositive3790580 - 379104717281.1
winged helix dna-binding domain-containing proteinSAMN06272759_11444Not AvailableNegative3791260 - 379157111610.8
dna-binding response regulator, narl/fixj family, contains rec and hth domainsSAMN06272759_11445Not AvailableNegative3792073 - 379279826212.0
protein of unknown functionSAMN06272759_11446Not AvailablePositive3793137 - 379375721697.4
peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domainsSAMN06272759_11447Not AvailableNegative3794485 - 379552539394.8
sh3 domain-containing proteinSAMN06272759_11448Not AvailableNegative3795830 - 379642320938.3

Displaying genes 3681 – 3690 of 4514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.