Novosphingobium sp. B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. B1 is a bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant as it allows the organism to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization of various ecological niches. The bacterium has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptation. The genomic sequence of Novosphingobium sp. B1 can be accessed under the accession number FWXL00000000.1. This genomic information is crucial for understanding the metabolic pathways and ecological roles of the bacterium, as well as its potential applications in biotechnology or environmental science. In ecological terms, the motility provided by flagella suggests that Novosphingobium sp. B1 may play an important role in biogeochemical cycles, particularly in environments where mobility is essential for survival and interaction with other microorganisms. The capabilities of this bacterium to adapt to its surroundings could further indicate its significance in microbial communities, contributing to processes such as biodegradation or nutrient cycling. Overall, the traits of Novosphingobium sp. B1 highlight its potential ecological importance and provide a basis for future research into its functional roles in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. B1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. B1 genome assembly, contig: Ga0157230_168,

Gene Summary

Adenine Count

869038 bp

Thymine Count

863885 bp

Guanine Count

1446973 bp

Cytosine Count

1460816 bp

Genome Length

4640712 bp

Protein-coding Genes

4439 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secaSAMN06272759_101259Not AvailablePositive260999 - 263734101756.0
hemolysin activation/secretion proteinSAMN06272759_101260Not AvailablePositive263931 - 26568563580.6
hypothetical proteinSAMN06272759_101261Not AvailablePositive265685 - 274306268824.0
chat domain-containing proteinSAMN06272759_101262Not AvailablePositive274303 - 277392109281.0
Trna-asnNot AvailableNot AvailablePositive277666 - 277740Not Available
nad+ kinaseSAMN06272759_101264Not AvailableNegative277821 - 27860028706.8
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN06272759_101265Not AvailablePositive278753 - 28003346100.1
transcription-repair coupling factorSAMN06272759_101266Not AvailableNegative280030 - 283524127430.0
antitoxin cptbSAMN06272759_101267Not AvailableNegative283552 - 28384511285.3
protein required for attachment to host cellsSAMN06272759_101268Not AvailableNegative283962 - 28434813914.7

Displaying genes 281 – 290 of 4514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.