Novosphingobium sp. B1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium sp. B1 is a bacterium characterized by the presence of flagella, which contribute to its motility. This trait is significant as it allows the organism to navigate its environment effectively, potentially aiding in nutrient acquisition and colonization of various ecological niches. The bacterium has a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and adaptation. The genomic sequence of Novosphingobium sp. B1 can be accessed under the accession number FWXL00000000.1. This genomic information is crucial for understanding the metabolic pathways and ecological roles of the bacterium, as well as its potential applications in biotechnology or environmental science. In ecological terms, the motility provided by flagella suggests that Novosphingobium sp. B1 may play an important role in biogeochemical cycles, particularly in environments where mobility is essential for survival and interaction with other microorganisms. The capabilities of this bacterium to adapt to its surroundings could further indicate its significance in microbial communities, contributing to processes such as biodegradation or nutrient cycling. Overall, the traits of Novosphingobium sp. B1 highlight its potential ecological importance and provide a basis for future research into its functional roles in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium sp. B1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium sp. B1 genome assembly, contig: Ga0157230_168,

Gene Summary

Adenine Count

869038 bp

Thymine Count

863885 bp

Guanine Count

1446973 bp

Cytosine Count

1460816 bp

Genome Length

4640712 bp

Protein-coding Genes

4439 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carotenoid cleavage dioxygenaseSAMN06272759_10486Not AvailableNegative1820712 - 182219354057.0
hypothetical proteinSAMN06272759_10487Not AvailableNegative1822250 - 182303829055.1
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenaseSAMN06272759_10488Not AvailableNegative1823139 - 182408334553.0
protocatechuate 4,5-dioxygenase beta subunitSAMN06272759_10489Not AvailableNegative1824156 - 182499831177.1
protocatechuate 4,5-dioxygenase alpha subunitSAMN06272759_10490Not AvailableNegative1825000 - 182543116573.7
4-oxalomesaconate hydrataseSAMN06272759_10491Not AvailableNegative1825428 - 182645338179.7
3-hydroxyisobutyrate dehydrogenaseSAMN06272759_10492Not AvailableNegative1826450 - 182727128560.2
transcriptional regulator, lysr familySAMN06272759_10493Not AvailableNegative1827335 - 182848639799.3
4-carboxy-4-hydroxy-2-oxoadipate aldolaseSAMN06272759_10494Not AvailablePositive1828593 - 182926723718.6
4-oxalomesaconate tautomeraseSAMN06272759_10495Not AvailablePositive1829275 - 183033036582.1

Displaying genes 1731 – 1740 of 4514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.