Desulfacinum hydrothermale DSM 13146

anaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Syntrophobacteria

Order

Syntrophobacterales

Family

Syntrophobacteraceae

Genus

Desulfacinum

Description

Desulfacinum hydrothermale DSM 13146 is an anaerobic bacterium characterized by its unique metabolic capabilities. As an anaerobe, it thrives in environments devoid of oxygen, which is critical for its survival and growth. This organism has a single replicon, indicating its genomic structure is organized within one circular chromosome, a trait that can influence its replication and genetic stability. The genomic data for Desulfacinum hydrothermale is cataloged under the accession FWXF00000000.1, which allows for further investigation into its genetic makeup and potential applications in various fields. Understanding the genomic features of this bacterium can provide insights into its metabolic pathways and ecological roles within its native habitat. Biologically, Desulfacinum hydrothermale likely plays a significant role in biogeochemical cycles, particularly in sulfur metabolism, given its classification within the Desulfacinum genus, which is known for sulfate-reducing capabilities. The presence of such organisms in anaerobic environments contributes to the reduction of sulfate to sulfide, influencing the overall sulfur cycle in their ecosystems. This process may have implications for nutrient cycling and the health of sedimentary environments, highlighting the importance of anaerobic bacteria like Desulfacinum hydrothermale in maintaining ecological balance in extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassSyntrophobacteria
OrderSyntrophobacterales
FamilySyntrophobacteraceae
GenusDesulfacinum
SpeciesDesulfacinum hydrothermale
StrainDSM 13146

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfacinum hydrothermale DSM 13146 genome assembly, contig:

Gene Summary

Adenine Count

725785 bp

Thymine Count

717170 bp

Guanine Count

1116018 bp

Cytosine Count

1137637 bp

Genome Length

3696795 bp

Protein-coding Genes

3270 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-adenosylmethionine decarboxylaseSAMN02746041_01946Not AvailablePositive2189732 - 219011213925.8
spermidine synthaseSAMN02746041_01947Not AvailablePositive2190109 - 219102934536.3
putative regulatory protein, fmdb familySAMN02746041_01948Not AvailablePositive2191107 - 219149314187.5
23s rrna pseudouridine1911/1915/1917 synthaseSAMN02746041_01949Not AvailablePositive2191468 - 219240335071.0
dynamin family proteinSAMN02746041_01950Not AvailableNegative2192324 - 219463088098.7
trna dimethylallyltransferaseSAMN02746041_01951Not AvailableNegative2194877 - 219583637045.9
dna mismatch repair protein mutlSAMN02746041_01952Not AvailableNegative2195857 - 219772268010.7
ggdef domain-containing protein, diguanylate cyclase (c-di-gmp synthetase) or its enzymatically inactive variantsSAMN02746041_01953Not AvailablePositive2197840 - 219929453618.1
rod shape-determining protein mrebSAMN02746041_01954Not AvailablePositive2199415 - 220043736823.9
hypothetical proteinSAMN02746041_01955Not AvailablePositive2200451 - 22006517283.67

Displaying genes 1941 – 1950 of 3320 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.