Brachybacterium faecium strain FM_RA_Lac3

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Brachybacterium

Description

Brachybacterium faecium strain FM_RA_Lac3 is a Gram-positive, rod-shaped bacterium primarily found in diverse environments, including continental shelf sediments of the Arabian Sea, the plant Populus euphratica, and poultry deep litter. This bacterium has been cataloged with the accession number FWFH00000000.1 and is characterized by having a single replicon. The presence of Brachybacterium faecium in continental shelf sediments indicates its capacity to thrive in marine environments, while its association with Populus euphratica suggests a potential role in soil or plant-associated ecosystems. The occurrence in poultry deep litter further points to its adaptability to various organic substrates and highlights its potential involvement in nutrient cycling within these habitats. The ecological significance of Brachybacterium faecium strain FM_RA_Lac3 may extend to its contributions to soil health and fertility, particularly in environments impacted by agricultural practices. Its ability to inhabit diverse ecosystems underscores its potential role in maintaining microbial diversity and ecosystem functions. Understanding the specific interactions and functions of this bacterium within its habitats could provide insights into its ecological contributions and potential applications in bioremediation or agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusBrachybacterium
SpeciesBrachybacterium faecium
Strainstrain FM_RA_Lac3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcontinental shelf sediments of the Arabian Sea; Populus euphratica; poultry deep litter
Biotic relationshipNot Available
Host(s)Populus euphratica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brachybacterium faecium strain FM_RA_Lac3 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6259 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lsu ribosomal protein l7/l12 (p1/p2)FM106_03370Not AvailableNegative629304 - 62966612319.8
lsu ribosomal protein l10p (p0)FM106_03375Not AvailableNegative629697 - 63020018041.8
lsu ribosomal protein l1p (l10ae)FM106_03380Not AvailableNegative630418 - 63111024695.0
lsu ribosomal protein l11p (l12e)FM106_03385Not AvailableNegative631226 - 63165114876.4
hypothetical proteinFM106_03390Not AvailableNegative631861 - 6320075674.97
transcription antitermination protein nusgFM106_03395Not AvailableNegative632432 - 63296520066.0
preprotein translocase subunit sece (tc 3.a.5.1.1)FM106_03400Not AvailableNegative633108 - 6332936819.52
lsu ribosomal protein l33p @ lsu ribosomal protein l33p, zinc-dependentFM106_03405Not AvailableNegative633325 - 6334745642.92
rna polymerase sporulation specific sigma factor sighFM106_03410Not AvailableNegative633562 - 63417323057.8
hypothetical protein duf901, similar to c-terminal domain of ribosome protection-type tc-resistance proteinsFM106_03415Not AvailableNegative634240 - 63476120134.9

Displaying genes 831 – 840 of 6465 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00037771D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideC15H29N2O11SChemical structure of 1D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideNot available
Average445.46Da
Monoisotopic445.1486574Da
BASm0016750X-14847C12H23NO10Chemical structure of X-14847NULL
Average341.313Da
Monoisotopic341.132195945Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.