Brachybacterium faecium strain FM_RA_Lac3

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermabacteraceae

Genus

Brachybacterium

Description

Brachybacterium faecium strain FM_RA_Lac3 is a Gram-positive, rod-shaped bacterium primarily found in diverse environments, including continental shelf sediments of the Arabian Sea, the plant Populus euphratica, and poultry deep litter. This bacterium has been cataloged with the accession number FWFH00000000.1 and is characterized by having a single replicon. The presence of Brachybacterium faecium in continental shelf sediments indicates its capacity to thrive in marine environments, while its association with Populus euphratica suggests a potential role in soil or plant-associated ecosystems. The occurrence in poultry deep litter further points to its adaptability to various organic substrates and highlights its potential involvement in nutrient cycling within these habitats. The ecological significance of Brachybacterium faecium strain FM_RA_Lac3 may extend to its contributions to soil health and fertility, particularly in environments impacted by agricultural practices. Its ability to inhabit diverse ecosystems underscores its potential role in maintaining microbial diversity and ecosystem functions. Understanding the specific interactions and functions of this bacterium within its habitats could provide insights into its ecological contributions and potential applications in bioremediation or agricultural practices.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermabacteraceae
GenusBrachybacterium
SpeciesBrachybacterium faecium
Strainstrain FM_RA_Lac3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcontinental shelf sediments of the Arabian Sea; Populus euphratica; poultry deep litter
Biotic relationshipNot Available
Host(s)Populus euphratica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brachybacterium faecium strain FM_RA_Lac3 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6259 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction dna helicase ruvaFM106_12855Not AvailableNegative2501440 - 250203021847.7
lrga-associated membrane protein lrgbFM106_12860Not AvailableNegative2502354 - 250302223735.3
holin-like protein cidaFM106_12865Not AvailableNegative2503019 - 250344416214.9
hypothetical proteinFM106_12870Not AvailablePositive2503599 - 25037455837.62
threonine dehydratase biosyntheticFM106_12875Not AvailableNegative2504060 - 250531045816.5
3-isopropylmalate dehydratase small subunitFM106_12880Not AvailableNegative2505315 - 250589922033.4
3-isopropylmalate dehydratase large subunitFM106_12885Not AvailableNegative2505886 - 250728051229.0
3-isopropylmalate dehydrogenaseFM106_12890Not AvailableNegative2507280 - 250833838419.4
2-isopropylmalate synthaseFM106_12895Not AvailableNegative2508338 - 250987655976.4
ketol-acid reductoisomeraseFM106_12900Not AvailableNegative2510027 - 251102236208.7

Displaying genes 2671 – 2680 of 6465 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00037771D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideC15H29N2O11SChemical structure of 1D-myo-inositol 2-(L-cysteinylamino)-2-deoxy-alpha-D-glucopyranosideNot available
Average445.46Da
Monoisotopic445.1486574Da
BASm0016750X-14847C12H23NO10Chemical structure of X-14847NULL
Average341.313Da
Monoisotopic341.132195945Da

Displaying 1–3 of 3 metabolites

Health Effects

No health effects information available for this bacterium.