Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
934650 bp
Thymine Count
951397 bp
Guanine Count
1706207 bp
Cytosine Count
1647608 bp
Genome Length
5239862 bp
Protein-coding Genes
4921 genes
Non-Coding Genes
287 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA2147405_00885 | Not Available | Positive | 887053 - 887409 | 13322.0 |
| Terminase small subunit | SAMEA2147405_00886 | Not Available | Positive | 887582 - 888049 | 17634.2 |
| Putative large terminase subunit | SAMEA2147405_00887 | Not Available | Positive | 888059 - 889711 | 62414.7 |
| Portal protein | SAMEA2147405_00888 | Not Available | Positive | 889725 - 891182 | 54292.4 |
| Capsid maturation protease | SAMEA2147405_00889 | Not Available | Positive | 891166 - 892341 | 41680.4 |
| Scaffolding protein | SAMEA2147405_00890 | Not Available | Positive | 892492 - 893130 | 22348.6 |
| Capsid decoration protein | SAMEA2147405_00891 | Not Available | Positive | 893145 - 893558 | 14496.9 |
| Major capsid protein | SAMEA2147405_00892 | Not Available | Positive | 893573 - 894631 | 37868.1 |
| Hypothetical protein | SAMEA2147405_00893 | Not Available | Positive | 894631 - 895065 | 14230.0 |
| Head-to-tail adaptor | SAMEA2147405_00894 | Not Available | Positive | 895065 - 895487 | 15656.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
