Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
934650 bp
Thymine Count
951397 bp
Guanine Count
1706207 bp
Cytosine Count
1647608 bp
Genome Length
5239862 bp
Protein-coding Genes
4921 genes
Non-Coding Genes
287 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable 3-hydroxybutyryl-coa dehydrogenase | SAMEA2147405_00194 | Not Available | Positive | 218998 - 219867 | 30781.3 |
| putative allophanate hydrolase | SAMEA2147405_00195 | Not Available | Negative | 220063 - 222060 | 71859.7 |
| urea carboxylase-associated protein 1 | SAMEA2147405_00196 | Not Available | Negative | 222057 - 222668 | 21761.8 |
| urea carboxylase-associated protein 2 | SAMEA2147405_00197 | Not Available | Negative | 222665 - 223498 | 29109.2 |
| putative amino-acid permease | SAMEA2147405_00198 | Not Available | Negative | 223495 - 225048 | 53848.1 |
| putative transcriptional regulator, tetr family | SAMEA2147405_00199 | Not Available | Positive | 225309 - 225968 | 23929.8 |
| possible mycolic acid synthase umaa1 | SAMEA2147405_00200 | Not Available | Positive | 226042 - 226911 | 33239.6 |
| polyphosphate:nucleotide phosphotransferase | SAMEA2147405_00201 | Not Available | Negative | 226937 - 227776 | 31533.1 |
| possible tetr-family transcriptional regulator | SAMEA2147405_00202 | Not Available | Negative | 227802 - 228533 | 27206.0 |
| transmembrane protein | SAMEA2147405_00203 | Not Available | Positive | 228589 - 229932 | 49460.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
