Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
934650 bp
Thymine Count
951397 bp
Guanine Count
1706207 bp
Cytosine Count
1647608 bp
Genome Length
5239862 bp
Protein-coding Genes
4921 genes
Non-Coding Genes
287 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ftsk/spoiiie atpase | SAMEA2147405_02548 | Not Available | Negative | 2531171 - 2532526 | 48447.6 |
| Attr | Not Available | Not Available | Positive | 2539338 - 2539383 | Not Available |
| Attl | Not Available | Not Available | Positive | 3612757 - 3612769 | Not Available |
| Integrase | SAMEA2147405_03615 | Not Available | Positive | 3612989 - 3613471 | 17319.2 |
| Portal protein | SAMEA2147405_03616 | Not Available | Negative | 3613649 - 3615127 | 52636.0 |
| Portal protein | SAMEA2147405_03617 | Not Available | Negative | 3615170 - 3616885 | 62656.6 |
| Hypothetical protein | SAMEA2147405_03618 | Not Available | Negative | 3617065 - 3617418 | 12971.9 |
| Gp8 | SAMEA2147405_03619 | Not Available | Positive | 3617468 - 3618028 | 20255.5 |
| uncharacterised protein | SAMEA2147405_03620 | Not Available | Positive | 3618133 - 3618879 | 30821.7 |
| Transglycosylase | SAMEA2147405_03621 | Not Available | Negative | 3618893 - 3619201 | 10657.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
