Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
934650 bp
Thymine Count
951397 bp
Guanine Count
1706207 bp
Cytosine Count
1647608 bp
Genome Length
5239862 bp
Protein-coding Genes
4921 genes
Non-Coding Genes
287 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Antirepressor | SAMEA2147405_02540 | Not Available | Negative | 2527691 - 2528512 | 29963.6 |
| Excise | SAMEA2147405_02541 | Not Available | Negative | 2528509 - 2528739 | 7896.6 |
| Attr | Not Available | Not Available | Positive | 2529140 - 2529190 | Not Available |
| Trna,type:lys,anti_codon:ttt; | Not Available | Not Available | Positive | 2529142 - 2529217 | Not Available |
| Trna,type:glu,anti_codon:ttc; | Not Available | Not Available | Positive | 2529357 - 2529429 | Not Available |
| Trna,type:asp,anti_codon:gtc; | Not Available | Not Available | Positive | 2529459 - 2529535 | Not Available |
| Trna,type:phe,anti_codon:gaa; | Not Available | Not Available | Positive | 2529572 - 2529648 | Not Available |
| Attl | Not Available | Not Available | Positive | 2529603 - 2529648 | Not Available |
| Integrase | SAMEA2147405_02546 | Not Available | Negative | 2529681 - 2530838 | 43021.3 |
| Hypothetical protein | SAMEA2147405_02547 | Not Available | Negative | 2530839 - 2531072 | 8754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
