Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein ykvu | SAMEA4008291_00595 | Not Available | Negative | 555002 - 556558 | 56296.1 |
| uncharacterised protein | SAMEA4008291_00596 | Not Available | Positive | 556674 - 556970 | 11675.9 |
| preprotein translocase subunit secf | SAMEA4008291_00597 | Not Available | Positive | 557007 - 559226 | 81910.3 |
| trka domain-containing protein | SAMEA4008291_00598 | Not Available | Positive | 559358 - 559855 | 18542.2 |
| uncharacterized integral membrane protein | SAMEA4008291_00599 | Not Available | Positive | 559919 - 560245 | 12015.0 |
| single-stranded-dna-specific exonuclease recj | SAMEA4008291_00600 | Not Available | Positive | 560301 - 562661 | 87272.6 |
| prpp-binding protein, adenine/guanine phosphoribosyltransferase | SAMEA4008291_00601 | Not Available | Positive | 562667 - 563179 | 18849.0 |
| gtp pyrophosphokinase | SAMEA4008291_00602 | Not Available | Positive | 563337 - 565541 | 84930.2 |
| d-tyrosyl-trna(tyr) deacylase | SAMEA4008291_00603 | Not Available | Positive | 565554 - 565997 | 16048.4 |
| n-acetylmuramoyl-l-alanine amidase w/ peptidoglycan-binding domain protein | SAMEA4008291_00604 | Not Available | Negative | 566024 - 567589 | 55216.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
