Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rna polymerase sigma 24 | SAMEA4008291_01204 | Not Available | Positive | 1167922 - 1168434 | 20190.4 |
| Hypothetical protein | SAMEA4008291_01205 | Not Available | Positive | 1168547 - 1169344 | 30004.0 |
| Hypothetical protein | SAMEA4008291_01206 | Not Available | Positive | 1169341 - 1170639 | 50826.6 |
| Portal protein | SAMEA4008291_01207 | Not Available | Positive | 1170643 - 1172079 | 54505.9 |
| Prohead protease | SAMEA4008291_01208 | Not Available | Positive | 1172099 - 1172944 | 31263.6 |
| Major capsid protein | SAMEA4008291_01209 | Not Available | Positive | 1172971 - 1173906 | 34515.1 |
| Duf3199 family protein | SAMEA4008291_01210 | Not Available | Positive | 1173923 - 1174306 | 13955.7 |
| phage-like element pbsx protein xkdh | SAMEA4008291_01211 | Not Available | Positive | 1174303 - 1174659 | 14002.9 |
| Hypothetical protein | SAMEA4008291_01212 | Not Available | Positive | 1174656 - 1175159 | 18868.9 |
| uncharacterised protein | SAMEA4008291_01213 | Not Available | Positive | 1175156 - 1175602 | 16847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
