Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Scaffold protein | SAMEA4008291_04719 | Not Available | Positive | 4484139 - 4484699 | 21060.6 |
| Major capsid protein | SAMEA4008291_04720 | Not Available | Positive | 4484732 - 4485640 | 32661.7 |
| uncharacterised protein | SAMEA4008291_04721 | Not Available | Positive | 4485696 - 4485887 | 6813.95 |
| Hypothetical protein | SAMEA4008291_04722 | Not Available | Positive | 4485901 - 4486287 | 14590.1 |
| Hypothetical protein | SAMEA4008291_04723 | Not Available | Positive | 4486303 - 4486623 | 11767.1 |
| Putative head-to-tail joining protein | SAMEA4008291_04724 | Not Available | Positive | 4486620 - 4487027 | 14916.7 |
| Hypothetical protein | SAMEA4008291_04725 | Not Available | Positive | 4487034 - 4487423 | 14524.1 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1 - 2645 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2 - 94 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 15 - 129 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
