Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA4008291_04101 | Not Available | Positive | 3863189 - 3863794 | 21548.0 |
| domain of uncharacterised function (duf955) | SAMEA4008291_04102 | Not Available | Positive | 3863796 - 3864404 | 23678.1 |
| Integrase | SAMEA4008291_04103 | Not Available | Positive | 3864391 - 3865605 | 47390.0 |
| Capsid family protein | SAMEA4008291_04134 | Not Available | Negative | 3896706 - 3898031 | 49027.0 |
| Prohead protease | SAMEA4008291_04135 | Not Available | Negative | 3898073 - 3898630 | 20920.6 |
| Portal protein | SAMEA4008291_04136 | Not Available | Negative | 3898620 - 3899852 | 46444.9 |
| Hypothetical protein | SAMEA4008291_04137 | Not Available | Negative | 3899852 - 3900046 | 7072.01 |
| Terminase | SAMEA4008291_04138 | Not Available | Negative | 3900062 - 3901834 | 68477.0 |
| Terminase small subunit | SAMEA4008291_04139 | Not Available | Negative | 3901806 - 3902291 | 18353.8 |
| Hnh endonuclease | SAMEA4008291_04140 | Not Available | Negative | 3902451 - 3902801 | 14029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
