Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA4008291_00525 | Not Available | Positive | 501582 - 501686 | 4082.79 |
| Type ii toxin-antitoxin system hicb family antitoxin | SAMEA4008291_00526 | Not Available | Negative | 501915 - 502331 | 15822.8 |
| Type ii toxin-antitoxin system hica family toxin | SAMEA4008291_00527 | Not Available | Negative | 502392 - 502574 | 6896.47 |
| uncharacterised protein | SAMEA4008291_00528 | Not Available | Positive | 502769 - 503398 | 25202.7 |
| Hypothetical protein | SAMEA4008291_00529 | Not Available | Positive | 503532 - 503906 | 14105.8 |
| Hypothetical protein | SAMEA4008291_00530 | Not Available | Positive | 503875 - 504201 | 12746.7 |
| Terminase small subunit p27 family | SAMEA4008291_00531 | Not Available | Positive | 504288 - 504794 | 19404.5 |
| Terminase large subunit | SAMEA4008291_00532 | Not Available | Positive | 504794 - 506503 | 65758.2 |
| Hypothetical protein | SAMEA4008291_00533 | Not Available | Positive | 506515 - 506745 | 8996.61 |
| Portal protein | SAMEA4008291_00534 | Not Available | Positive | 506751 - 508001 | 47574.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
