Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative terminase large subunit | SAMEA4008291_01935 | Not Available | Positive | 1866823 - 1868613 | 69439.0 |
| Portal protein | SAMEA4008291_01936 | Not Available | Positive | 1868626 - 1869846 | 46530.1 |
| Clp protease | SAMEA4008291_01937 | Not Available | Positive | 1869821 - 1870543 | 26170.2 |
| Hk97 family phage major capsid protein | SAMEA4008291_01938 | Not Available | Positive | 1870540 - 1871745 | 44100.4 |
| Head-tail connector protein | SAMEA4008291_01939 | Not Available | Positive | 1871759 - 1872073 | 11548.9 |
| Head-tail joining protein | SAMEA4008291_01940 | Not Available | Positive | 1872080 - 1872409 | 12402.1 |
| Head-tail joining protein | SAMEA4008291_01941 | Not Available | Positive | 1872406 - 1872834 | 15841.8 |
| uncharacterised protein | SAMEA4008291_01942 | Not Available | Positive | 1872831 - 1873220 | 14884.4 |
| Major tail protein | SAMEA4008291_01943 | Not Available | Positive | 1873278 - 1873853 | 20538.1 |
| Hypothetical protein | SAMEA4008291_01944 | Not Available | Positive | 1873930 - 1874250 | 12132.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
