Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Xkdx family protein | SAMEA4008291_01789 | Not Available | Positive | 1762816 - 1763001 | 6936.06 |
| Holin | SAMEA4008291_01790 | Not Available | Positive | 1763051 - 1763473 | 15725.4 |
| N-acetylmuramoyl-l-alanine amidase | SAMEA4008291_01791 | Not Available | Positive | 1763519 - 1764682 | 42862.2 |
| Attr | Not Available | Not Available | Positive | 1771339 - 1771403 | Not Available |
| Attl | Not Available | Not Available | Positive | 1852765 - 1852778 | Not Available |
| Site-specific recombinase | SAMEA4008291_01910 | Not Available | Negative | 1852860 - 1854008 | 44695.3 |
| Membrane associated lipoprotein | SAMEA4008291_01911 | Not Available | Negative | 1854076 - 1854540 | 18068.9 |
| Rep protein | SAMEA4008291_01912 | Not Available | Negative | 1854555 - 1854860 | 11830.9 |
| Xre family toxin-antitoxin system antitoxin component | SAMEA4008291_01913 | Not Available | Positive | 1855129 - 1855335 | 7783.65 |
| uncharacterised protein | SAMEA4008291_01914 | Not Available | Positive | 1855301 - 1855594 | 11912.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
