Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2548455 bp
Thymine Count
2530392 bp
Guanine Count
2617194 bp
Cytosine Count
2591023 bp
Genome Length
10697134 bp
Protein-coding Genes
10750 genes
Non-Coding Genes
484 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative terminase small subunit | SAMEA4008291_01769 | Not Available | Positive | 1742253 - 1742768 | 19243.0 |
| Phage terminase large subunit | SAMEA4008291_01770 | Not Available | Positive | 1742765 - 1744474 | 65622.0 |
| Hypothetical protein | SAMEA4008291_01771 | Not Available | Positive | 1744488 - 1744658 | 6412.34 |
| Portal protein | SAMEA4008291_01772 | Not Available | Positive | 1744663 - 1745943 | 48196.0 |
| Hk97 familygprohead protease | SAMEA4008291_01773 | Not Available | Positive | 1745906 - 1746532 | 24115.4 |
| Major capsid protein | SAMEA4008291_01774 | Not Available | Positive | 1746571 - 1747863 | 49076.1 |
| Hypothetical protein | SAMEA4008291_01775 | Not Available | Positive | 1747886 - 1748302 | 14305.6 |
| Phage dna packaging protein | SAMEA4008291_01776 | Not Available | Positive | 1748320 - 1748622 | 10985.0 |
| Putative head-tail adaptor | SAMEA4008291_01777 | Not Available | Positive | 1748612 - 1748929 | 12378.8 |
| Hk97 gp10 familygprotein | SAMEA4008291_01778 | Not Available | Positive | 1748926 - 1749324 | 14566.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
