Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313133 bp
Thymine Count
1304148 bp
Guanine Count
2315813 bp
Cytosine Count
2329210 bp
Genome Length
7263390 bp
Protein-coding Genes
7105 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | SAMEA2070716_04878 | Not Available | Negative | 4807105 - 4808307 | 43673.9 |
| protein of uncharacterised function (duf3000) | SAMEA2070716_04879 | Not Available | Negative | 4808330 - 4808974 | 22451.3 |
| probable uroporphyrinogen decarboxylase (heme) | SAMEA2070716_04880 | Not Available | Positive | 4808991 - 4810085 | 38105.9 |
| protoporphyrinogen oxidase hemy' | SAMEA2070716_04881 | Not Available | Positive | 4810102 - 4811478 | 46643.6 |
| putative chlorite dismutase | SAMEA2070716_04882 | Not Available | Positive | 4811471 - 4812166 | 26233.0 |
| probable chloramphenicol resistance protein | SAMEA2070716_04883 | Not Available | Positive | 4812365 - 4813558 | 40203.9 |
| transcription initiation factor tfiid, subunit taf12 (also component of histone acetyltransferase saga) | SAMEA2070716_04884 | Not Available | Positive | 4814072 - 4815721 | 57827.7 |
| uncharacterised protein | SAMEA2070716_04885 | Not Available | Positive | 4815734 - 4816261 | 18014.1 |
| putative liporotein lppu | SAMEA2070716_04886 | Not Available | Positive | 4816479 - 4816859 | 13702.2 |
| peptide methionine sulfoxide reductase msrb | SAMEA2070716_04887 | Not Available | Negative | 4817168 - 4817557 | 14719.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
