Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313133 bp
Thymine Count
1304148 bp
Guanine Count
2315813 bp
Cytosine Count
2329210 bp
Genome Length
7263390 bp
Protein-coding Genes
7105 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleic acid binding, ob-fold, trna /helicase-type | SAMEA2070716_04868 | Not Available | Positive | 4795527 - 4795898 | 13523.3 |
| protein of uncharacterised function (duf3159) | SAMEA2070716_04869 | Not Available | Positive | 4795899 - 4796642 | 26623.4 |
| trk system potassium uptake protein ceoc | SAMEA2070716_04870 | Not Available | Negative | 4796652 - 4797311 | 23799.5 |
| trk system potassium uptake protein ceob | SAMEA2070716_04871 | Not Available | Negative | 4797308 - 4797982 | 23657.0 |
| amino acid permease | SAMEA2070716_04872 | Not Available | Positive | 4798106 - 4800112 | 72766.8 |
| rna methyltransferase | SAMEA2070716_04873 | Not Available | Positive | 4800113 - 4801279 | 41784.8 |
| probable na+/h+ antiporter nhaa | SAMEA2070716_04874 | Not Available | Positive | 4801379 - 4802704 | 46189.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMEA2070716_04875 | Not Available | Positive | 4802726 - 4804642 | 68007.3 |
| diaminopimelate decarboxylase | SAMEA2070716_04876 | Not Available | Negative | 4804666 - 4806192 | 55522.9 |
| probable chloramphenicol acetyltransferase | SAMEA2070716_04877 | Not Available | Negative | 4806380 - 4807069 | 26147.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
