Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313133 bp
Thymine Count
1304148 bp
Guanine Count
2315813 bp
Cytosine Count
2329210 bp
Genome Length
7263390 bp
Protein-coding Genes
7105 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical glycosyl transferase | SAMEA2070716_04607 | Not Available | Negative | 4545333 - 4546577 | 45435.4 |
| pup--protein ligase | SAMEA2070716_04608 | Not Available | Positive | 4546659 - 4548101 | 54335.4 |
| cullin, a subunit of e3 ubiquitin ligase | SAMEA2070716_04609 | Not Available | Positive | 4548208 - 4549095 | 33056.9 |
| protein pafb | SAMEA2070716_04610 | Not Available | Positive | 4549159 - 4550151 | 35810.5 |
| protein pafc | SAMEA2070716_04611 | Not Available | Positive | 4550148 - 4551104 | 34033.4 |
| sec-independent protein translocase protein tata/e | SAMEA2070716_04612 | Not Available | Positive | 4551180 - 4551428 | 8827.72 |
| sec-independent protein translocase protein tatc homolog | SAMEA2070716_04613 | Not Available | Positive | 4551543 - 4552415 | 32133.5 |
| helicase hely | SAMEA2070716_04614 | Not Available | Positive | 4552438 - 4555206 | 101099.0 |
| conserved membrane protein of uncharacterised function | SAMEA2070716_04615 | Not Available | Positive | 4555286 - 4555993 | 24753.6 |
| 5'-3' exonuclease | SAMEA2070716_04616 | Not Available | Negative | 4556047 - 4557060 | 35565.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
