Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1313133 bp
Thymine Count
1304148 bp
Guanine Count
2315813 bp
Cytosine Count
2329210 bp
Genome Length
7263390 bp
Protein-coding Genes
7105 genes
Non-Coding Genes
184 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable shikimate-5-dehydrogenase (aroe) | SAMEA2070716_02889 | Not Available | Negative | 2880475 - 2881290 | 27567.0 |
| putative aminodeoxychorismate lyase | SAMEA2070716_02890 | Not Available | Negative | 2881280 - 2882497 | 43869.8 |
| putative holliday junction resolvase | SAMEA2070716_02891 | Not Available | Negative | 2882563 - 2883063 | 17929.0 |
| alanyl-trna synthetase | SAMEA2070716_02892 | Not Available | Negative | 2883069 - 2885744 | 95949.4 |
| uncharacterised protein | SAMEA2070716_02893 | Not Available | Negative | 2885969 - 2886292 | 10514.6 |
| aaa atpase | SAMEA2070716_02894 | Not Available | Negative | 2886363 - 2887718 | 47433.7 |
| protein of uncharacterised function (duf3097) | SAMEA2070716_02895 | Not Available | Negative | 2887750 - 2888592 | 30767.8 |
| uncharacterised protein | SAMEA2070716_02896 | Not Available | Negative | 2888757 - 2889929 | 41856.7 |
| uncharacterized protein conserved in bacteria (duf2248) | SAMEA2070716_02897 | Not Available | Negative | 2890050 - 2891075 | 37612.3 |
| uncharacterized protein conserved in bacteria | SAMEA2070716_02898 | Not Available | Negative | 2891068 - 2891982 | 33288.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
