Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1937024 bp
Thymine Count
1939578 bp
Guanine Count
2099634 bp
Cytosine Count
2058728 bp
Genome Length
8076405 bp
Protein-coding Genes
7179 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipoprotein lpqu | SAMEA2275726_00651 | Not Available | Negative | 620967 - 621734 | 27134.0 |
| putative iron permease ftr1 | SAMEA2275726_00652 | Not Available | Positive | 621897 - 622787 | 31224.7 |
| efem/efeo family lipoprotein | SAMEA2275726_00653 | Not Available | Positive | 622784 - 623938 | 41294.4 |
| probable deferrochelatase/peroxidase efen precursor | SAMEA2275726_00654 | Not Available | Positive | 623919 - 625223 | 46459.0 |
| deferrochelatase/peroxidase efeb precursor | SAMEA2275726_00655 | Not Available | Negative | 625229 - 626455 | 44395.2 |
| ferrous iron permease efeu | SAMEA2275726_00656 | Not Available | Negative | 626473 - 628524 | 71687.7 |
| nucleoside triphosphate pyrophosphohydrolase | SAMEA2275726_00657 | Not Available | Negative | 628638 - 629690 | 38386.8 |
| transcription-repair coupling factor | SAMEA2275726_00658 | Not Available | Negative | 629687 - 633337 | 130935.0 |
| diaminopimelate decarboxylase | SAMEA2275726_00659 | Not Available | Positive | 633556 - 634902 | 48554.1 |
| uncharacterised protein | SAMEA2275726_00660 | Not Available | Negative | 634899 - 635210 | 10454.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
