Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacteroides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacteroides |
| Species | Mycobacteroides abscessus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | chloraminated water |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1937024 bp
Thymine Count
1939578 bp
Guanine Count
2099634 bp
Cytosine Count
2058728 bp
Genome Length
8076405 bp
Protein-coding Genes
7179 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein dacb1 | SAMEA2275726_00371 | Not Available | Negative | 345532 - 346848 | 45578.4 |
| strictosidine synthase family protein | SAMEA2275726_00372 | Not Available | Negative | 346887 - 347915 | 35964.1 |
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMEA2275726_00373 | Not Available | Positive | 348111 - 349802 | 61588.8 |
| rna polymerase sigma-70 factor | SAMEA2275726_00374 | Not Available | Positive | 349828 - 350736 | 33010.4 |
| alkylhydroperoxidase like protein, ahpd family | SAMEA2275726_00375 | Not Available | Negative | 350733 - 351398 | 24443.2 |
| succinate dehydrogenase, iron-sulfur subunit | SAMEA2275726_00376 | Not Available | Negative | 351438 - 352220 | 29057.2 |
| succinate dehydrogenase | SAMEA2275726_00377 | Not Available | Negative | 352222 - 353988 | 64846.0 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | SAMEA2275726_00378 | Not Available | Negative | 354002 - 354484 | 18327.4 |
| succinate dehydrogenase, cytochrome b556 subunit | SAMEA2275726_00379 | Not Available | Negative | 354481 - 354903 | 15928.8 |
| cytidine deaminase | SAMEA2275726_00380 | Not Available | Positive | 355163 - 355561 | 14179.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Macrophage necrosis | Causes | PMC11064574 |
| Ntm-pd | Causes | PMC11100324 |
| Lung diseases | Causes | PMC11716203 |
| Chronic pulmonary and disseminated infections | Causes | PMC12871676 |
| Chronic pulmonary infections | Causes | PMC12871676 |
| Disseminated infections | Causes | PMC12871676 |
| Non-cavitary pneumonia | Causes | PMC13221995 |
| Mycobacterial diseases | Causes | PMC5276850 |
| Pulmonary infections | Causes | PMC6395927 |
| Endocarditis | Causes | PMC7642850 |
